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synteny
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physical
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today
however
biologists
usually
refer
conservation
blocks
order
synteny
inferring
ancestral
genomes
learn
science
scitable
comparing
conserved
genes
groups
organisms
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ancestor
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some
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condition
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located
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there
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10 BÜCHER, DIE MIT «SYNTENY» IM ZUSAMMENHANG STEHEN
Entdecke den Gebrauch von
synteny in der folgenden bibliographischen Auswahl. Bücher, die mit
synteny im Zusammenhang stehen und kurze Auszüge derselben, um seinen Gebrauch in der Literatur kontextbezogen darzustellen.
1
Molecular Techniques in Crop Improvement: 2nd Edition
The terms synteny and collinearity have been extensively used to denote the
presence of two or more genes on corresponding chromosomes and in
corresponding order, respectively. The extent of synteny and co-linearity vary
among the ...
S. Mohan Jain, D. S. Brar, 2009
It enabled quick and high-throughput synteny mapping of any kind of marker for
which primers could be developed. DNA from individual cell hybrid clones in the
panel is used as a template to obtain amplification product from the primers.
Anatoly Ruvinsky, Jennifer A. Marshall Graves, 2005
3
Molecular Marker Systems in Plant Breeding and Crop Improvement
4 Comparative Mapping and Synteny Despite more than 60 million years of
evolution within the subfamily of the Poaceae, the individual grass genomes are
characterized by large segments of conserved linkage blocks that display
colinear ...
Horst L?rz, Gerhard Wenzel, 2007
4
The Genetics of the Horse
The current status of the synteny map Three groups have contributed synteny
information for the horse using horse X mouse somatic cell hybrid clones. In 1993
, Williams et al published three synteny groups based on eight type I loci mapped
...
Ann T. Bowling, Anatoly Ruvinsky, 2000
5
Bioinformatics: Tools and Applications
3.4 Web-Based Synteny Browsers Interest in comparative genomics has risen
with the number of genome sequences due to decreasing costs of DNA
sequencing. Accordingly, computational biologists have begun to address the
need for ...
David Edwards, Jason Stajich, David Hansen, 2009
6
Issues in Genomics and Non-Human Genetic Research: 2011 Edition
Scientists discuss in 'Large synteny blocks revealed between Caenorhabditis
elegans and Caenorhabditis briggsae genomes using OrthoCluster' new findings
in genomics. According to a study from Burnaby, Canada, “Accurate identification
...
7
Algorithms in Bioinformatics: 9th International Workshop, ...
9th International Workshop, WABI 2009, Philadelphia, USA, September 12-13,
2009. Proceedings Steven L. Salzberg, Tandy Warnow. Decoding Synteny
Blocks and Large-Scale Duplications in Mammalian and Plant Genomes Qian
Peng1,⋆, ...
Steven L. Salzberg, Tandy Warnow, 2009
8
Computational Genomics: Current Methods
In this case, we have protein-based synteny between two genomes where most
neutral sequence does not align. Gene pairs A-A′, C-C′, and D-D′ are bi-
directionally unique matches. Gene B is the best hit for both B′ and B′′, but B
′ ...
9
Comparative Genomics: International Workshop, RECOMB-CG ...
We examined direct synteny in the 372 segmental duplications in the dataset (
See Methods). Distant segmental duplicates are more likely to be evolving
asymmetrically at the protein and DNA levels when one of the genes has lost
direct ...
Craig Nelson, Stéphane Vialette, 2008
10
The Zebrafish: Genetics, Genomics and Informatics
The Synteny Pipeline The analysis of conserved syntenies can help resolve
cases like msx where phylogenetic trees and RBH fail. In the Synteny Database,
output from the mRBH Analysis Pipeline feeds into the Synteny Pipeline (
Catchen et ...
H. William Detrich, Monte Westerfield, Leonard I. Zon, 2011
10 NACHRICHTEN, IN DENEN DER BEGRIFF «SYNTENY» VORKOMMT
Erfahre, worüber man in den einheimischen und internationalen Medien spricht und wie der Begriff
synteny im Kontext der folgenden Nachrichten gebraucht wird.
Ceres Prices $1.5M Financing
... and explore various kinds of genomic data including genetic maps, scaffolds, physical maps, gene models, synteny, QTLs, SNPs, RNA-seq, and SNP chips. «GenomeWeb, Jul 15»
Analysis of Kiwi Genome Provides Clues to Nocturnal Adaptation
They found that nearly 92 percent of the zebra finch sequences that are syntenic-chain-alignable to the chicken showed conserved synteny in the kiwi, which ... «GenomeWeb, Jul 15»
The maize cytochrome P450 CYP79A61 produces …
A synteny analysis of the maize and sorghum genomes revealed that GRMZM2G138248 and sorghum CYP79A1 seem not to represent orthologous genes ... «BMC Blogs Network, Mai 15»
Chromosomal patterns of diversity and differentiation in creepers: a …
In songbirds, strong patterns of inter-chromosomal synteny, the published genome of a songbird and the ability to obtain thousands of genetic loci for many ... «Nature.com, Apr 15»
Single-cell genomics-based analysis of virus–host interactions in …
To obtain additional evidence, whole-genome synteny comparisons were performed with EasyFig for Mac version 2.1 (Sullivan et al., 2011) using tBLASTx and ... «Nature.com, Apr 15»
International Team Sequences Tibetan Plateau Frog Genome
... protein-coding genes — 23,408 genes in the case of N. parkeri — and share widespread synteny, despite falling in distinct branches of the frog family tree. «GenomeWeb, Mär 15»
CSHL Scientists Sequence Yeast Genome with Oxford Nanopore …
"If you're interested at all in telomeres or gene cassettes or some of the synteny block-type elements, you need the long read technology." Researchers have ... «GenomeWeb, Jan 15»
Genomes of chimpanzee malaria parasites reveal how they might …
The 14 chromosomes of the nuclear genome are aligned and regions with shared synteny are shown shaded in grey, divergent loci are circled. © Nature ... «Nature Middle East, Sep 14»
New Ragout Software Improves on Existing Methods of Reference …
"The above procedure is repeated multiple times with different synteny block scales, and the resulting scaffolds in these iterations are reconciled into a single set ... «GenomeWeb, Jun 14»
Rainbow Trout Genome Gives Look into Consequences of Genome …
The researchers reconstructed the double-conserved synteny, or paralogous regions originating from the salmonid-specific duplication event. They then ... «GenomeWeb, Apr 14»
